This is an annotated list of the published papers and reports that have included REEF data. The list is in chronological order. Papers that are available for viewing in .pdf format are noted.
Also see the Projects page for links to additional reports.
This paper features research findings from powerful genetic techniques and the REEF survey data that reveal two new species of hamlet in the Caribbean. As REEF Caribbean surveyors know, hamlets are a group of colorful small sea basses that can sometimes cause ID confusion because of their myriad of colors and patterns. The varied color patterns in these small predators are thought to be a result of mimicry of other colorful herbivore species. There has been ongoing debate in the scientific world about which are actual species and which are simply just color variants or morphotypes. The research featured in the paper revealed significant genetic differences among what seemed to simply be variations of the well-known Barred Hamlet. The two new species are the Florida Barred Hamlet, Hypoplectrus floridae, and the Contoy Hamlet, H. ecosur. The typical Barred Hamlet (H. puella) that is found throughout the Caribbean will be updated to be called the Caribbean Barred Hamlet. Florida Barred Hamlet have been found in the eastern Gulf of Mexico and South Florida, and it overlaps in range with the Barred Hamlet in those area. At the time of publication, the Contoy Hamlet had only been documented on Isla Contoy near the northern tip of the Yucatan peninsula and possibly Isla Mujeres. Florida Barred Hamlet are distinguished by a pair of symmetrical dark spots at the base of the caudal fin along with a break in the mid-body narrow bar. The Contoy Hamlet is distinguished by the same paid of dark spots at the base of the tail as well as a series of additional dark spots along the upper caudal peduncle and below the dorsal fin.
Climate change is expected to cause a poleward shift of many temperate species, however, a mechanistic understanding of how temperature and species' life histories interact to produce observed adult range is often lacking. The authors evaluated the hypothesis that juvenile thermal tolerance determines northern range in gray snapper (Lutjanus griseus), a species commonly caught as juveniles along the US Atlantic coast well north of their adult distribution, using a combined laboratory, field and modeling approach. To evaluate the relationship between juvenile thermal tolerance criteria and adult distributions, the authors used the REEF database to quantify adult distribution. There was a strong correspondence between observations of adult gray snapper from the database of recreational divers vs. latitude with that of the predicted survival of juveniles vs. latitude from their modeling analysis. The agreement between the laboratory-derived thermal tolerance metrics, the spatial distribution of winter temperature, and the distribution of adult gray snapper support the hypothesis that the adult range of gray snapper is largely limited by the overwinter survival of juveniles.
This paper explores detectability rates of lionfish using underwater visual census methods such as belt transects and stationary visual census. Knowing the error in these methods specficially for lionfish is necessary to help study this invasive species in the western Atlantic. The research was conducted at the Cape Eleuthera Institute, where much of REEF's work on lionfish is conducted.The authors found that the two census methods detect fewer than 30% of lionfish present in an area and, in more than 50% of the cases, fail to detect any lionfish when one or more indivudals are actually present. Two factors affected the ability to detect lionfish: lionfish body size and habitat complexity.
This paper is part of the larger body of genetic research being conducted on Nassau Grouper in the Caribbean. The authors identified ten polymorphic microsatellite loci for Nassau grouper (Epinephelus striatus) by cross-amplification of loci isolated in Gulf coney (Epinephelus acanthistius). Samples from three geographic localities were scored for these loci –Glovers Reef off Belize (n = 50), Little Cayman (n = 50) and Grammanik Bank in the U.S. Virgin Islands (n = 50). Screening samples yielded 8 to 27 alleles per locus with observed levels of heterozygosity ranging from 0.30 to 0.96. Markers will be used in a Caribbean-wide study of Nassau grouper to understand patterns of genetic connectivity, as well as to contribute to fisheries management and conservation.
This seminal publication was created by REEF and our collaborators at NOAA, ICRI, the United Nations Environment Programme, Caribbean Environment Programme, SPAW-RAC, and the over 40 participants of the 2010 Caribbean Regional Lionfish Workshop. The guide provides best practices for lionfish control and management, including control strategies, outreach and education, research, monitoring, legal considerations, and ideas for securing resources and partnerships. By following these best practices, resource managers can reduce the local impacts of invasive lionfish in marine protected areas and other places of ecological and economic importance. Available online as a PDF through the link below. Also available as an ebook. Spanish edition also available (email reefhq@REEF.org for more information).
Predicting and mitigating the effects of invasive Indo-Pacific lionfish Pterois volitans on Caribbean fish communities requires a thorough understanding of the species’ predation behaviour in the invaded range, including the types and amounts of prey consumed and how foraging patterns vary in relation to extrinsic conditions. We studied the activity levels and prey consumption rates of lionfish on 12 shallow coral reefs in the Bahamas in relation to time of day and prey availability. Lionfish predation rates and activity levels were significantly higher during crepuscular (dawn and dusk) periods than at mid-day. Available prey fish biomass was highest at dawn but lower at mid-day and dusk, suggesting that lionfish predation activity is not limited by prey availability alone. Our calculated average daily mass-specific prey consumption rates, which incorporated daily variation, was ~3 times the estimates obtained from studies of captive lionfish in their native range and of invasive lionfish observed only during the day. Our results will help to predict more accurately the effect of predation by invasive lionfish on native reef fish communities.
REEF Advanced Assessment Team Member, Dave Grenda, recently co-authored a paper documenting behavioral observations of young Great Barracuda occurring on live bottom sub-tropical reefs primarily at Gray's Reef National Marine Sanctuary off the coast of Georgia. For the past three years Dave assisted University of Connecticut researcher, Dr. Peter Auster, in studying behavioral interactions of piscivores and their prey. During REEF surveys on these cruises, Dave and the other researchers documented young-of-year (YOY) Great Barracuda (those individuals that had very recently settled to the reef, and were between 2-3 inches in length) hunting YOY Tomtate and Silverside that were taking refuge under ledges. Groups of YOY Barracuda would attack, capture, and consume the prey. Prey that escaped the Barracuda retreated to reef edges and were often consumed by bottom-dwelling adult piscivores such as Black Sea Bass, Bank Sea Bass, and Scamp Grouper. These findings indicate that given the strong functional role the young Barracuda have on driving species interactions, greater attention should be given to the roles played by the wider diversity of YOY piscivores recruiting to reef communities.
This paper reviewed the population status of Atlantic goliath grouper, Epinephelus itajara, in coastal waters of the southeastern United States. The study is based on quantitative surveys conducted by the authors and the Florida Fish and Wildlife Conservation Commission’s Artificial Reef Program (n = 505), coupled with data submitted by REEF surveyors (n = 27,542) over 15+ yrs. The primary objective of the study is to describe the distribution and abundance of the goliath grouper population of the southeastern US with a focus on Florida, the center of US abundance for this species, the center for the historical fishery, and now the center of much controversy. A secondary, but quite important objective is to demonstrate the utility of using existing databases, such as that of REEF to provide what often amounts to the best scientific data available for informing management decisions, particularly in areas and for species for which there is no traditional fishery- dependent data collection.
The authors found that the population of goliath grouper, after dramatic fishery-induced declines in the 1970s and 1980s, and eventual fishery closure in the 1990s, increased off southwest Florida in the mid-1990s, directly offshore of the high-quality mangrove nursery of the Ten Thousand Islands. It then expanded north and south, eventually increasing off Florida’s central east coast. The study also evaluated tagging data, which showed that, regardless of life stage, individuals showed strong site fidelity to home sites: juveniles to mangrove nursery sites and adults to offshore reefs. All long-distance movements appeared to be in response to approaching maturity, with juveniles emigrating from mangroves to take up residence on offshore reefs, to seasonal spawning activity, with adults moving from home sites to aggregation sites, or to apparent feeding sites in inlets. Understanding these patterns of population recovery and movement is fundamental to devising appropriate management policies.
Hamlets are a group of colourful coral reef fish found throughout the Caribbean. Ten species of hamlet have been discovered and each can be easily recognized by its own distinct colour pattern. In some areas, as many as seven varieties can be found on a single reef. However, most hamlet species are only found at specific locations. The blue hamlet, for example, is found only in the Florida region. How these very different looking, yet very closely related species came to be has been a a subject of debate among scientists. Data collected by divers and snorkelers as part of the REEF Volunteer Fish Survey Project were used in a large analysis to better understand the patterns of evolution in these and other marine fishes. They found that even widespread hamlet species are not found everywhere, and identified high density hotspots for each species. Because different species hotspots overlap and many species have more than one hotspot, the results do not support the theory that hamlets originated independently when they were geographically separated in the past. The research also showed how ecological factors, such as competition for food or habitat, may influence how different hamlet species co-exist. To contact the lead author - firstname.lastname@example.org
Long-time REEF supporters, Les and Keri Wilk of ReefNet, recently discovered and photographed a distinctively marked population of the Greenbanded Goby, Elacatinus multifasciatus, on the island of Utila, Honduras. The population was distinguished by a prominent red stripe across the cheek that is not found on other populations of Greenbanded Gobies, as well as more numerous green bars on the body. The Wilks contacted Dr. Ben Victor, a reef fish taxonomic expert, who conducted a regional genetic comparison of Greenbanded Gobies to evaluate hidden diversity within this colorful and cryptic reef fish. As part of the study, the REEF database was used to document the current geographic range of the species. Ben's results identified the unique looking fish to be a separate species that is now called the Redcheek Goby (E. rubrigenis). He also discovered that, based on genetic results, Greenbanded Goby along coastal Panama, despite looking just like others in the species, are most likely a distinct species that will now be called Panamanian Greenbanded Goby (E. panamensis)